Deck 11: DNA Replication and Recombination

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Question
The amount of DNA that is replicated from a single origin of replication is referred to as an_________ .

A)Okazaki fragment
B)ori
C)fork
D)primer
E)replicon
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Question
Given the accompanying diagram,assume that a G1 chromosome left underwent one round of replication in 3H- thymidine and the metaphase chromosome right)had both chromatids labeled.Which of the following replicative models conservative,dispersive,semiconservative)could be eliminated by this observation? <strong>Given the accompanying diagram,assume that a G1 chromosome left underwent one round of replication in<sup> </sup><sup>3</sup>H- thymidine and the metaphase chromosome right)had both chromatids labeled.Which of the following replicative models conservative,dispersive,semiconservative)could be eliminated by this observation?  </strong> A)semiconservative B)dispersive C)conservative D)conservative and dispersive E)semiconservative and dispersive <div style=padding-top: 35px>

A)semiconservative
B)dispersive
C)conservative
D)conservative and dispersive
E)semiconservative and dispersive
Question
Which DNA Polymerase III subunit is not part of the clamp loading assembly?

A)0
B)ç
C)6
D)v
E)y
Question
If E.coli DNA polymerase III was able to initiate DNA synthesis opposite a single- stranded template,which molecules)would no longer be essential?

A)single- stranded binding proteins
B)DNA gyrase
C)DNA ligase
D)DNA polymerase I
E)helicase
Question
DNA polymerase III adds nucleotides_________ .

A)in the place of the primer RNA after it is removed
B)to internal sites in the DNA template
C)to the 5' end of the RNA primer
D)to the 3' end of the RNA primer
E)to both ends of the RNA primer
Question
DNA replication occurs by adding_________ .

A)NTPs to the 5' end of the daughter strand
B)dNTPs to the 3' end of the template strand
C)NTPs to the 3' end of the daughter strand
D)dNTPs to the 3' end of the daughter strand
E)dNTPs to the 5' end of the template strand
Question
Which terms accurately reflect the nature of replication of the chromosome in E.coli?

A)bidirectional and multirepliconic
B)bidirectional and fixed point of initiation
C)unidirectional and fixed point of initiation
D)multirepliconic and telomeric
E)unidirectional and reciprocal
Question
As unwinding of the helix occurs during DNA replication,tension referred to as_________ is created ahead of the replication fork.This tension is relieved by the action of_________ .

A)supercoiling; single- stranded binding proteins
B)processivity; DNA gyrase
C)supercoiling; DNA gyrase
D)supercoiling; DNA helicase
E)processivity; primase
Question
Which of the following terms accurately describes the replication of DNA in vivo?

A)conservative
B)dispersive
C)nonreciprocal
D)semidiscontinuous
E)nonlinear
Question
DNA polymerase I is thought to add nucleotides_________ .

A)to the 5' end of the primer
B)on single- stranded templates without need for an RNA primer
C)to the 3' end of the primer
D)in the place of the primer RNA after it is removed
E)in a 5' to 5' direction
Question
Which of the following statement about DNA replication in E.coli is correct?

A)Single- stranded binding proteins are only required on the leading strand.
B)Only the lagging strand needs to be primed.
C)There are two molecules of DNA polymerase III per replication fork.
D)DNA polymerase I follows closely behind DNA helicase in the replication fork.
E)There are two molecules of DNA helicase per replication fork.
Question
The discontinuous aspect of replication of DNA in vivo is caused by_________.

A)topoisomerases cutting the DNA in a random fashion
B)sister- chromatid exchanges
C)trinucleotide repeats
D)the 5' to 3' polarity restriction
E)polymerase slippage
Question
The protein product of the E.coli dnaE gene is a component of_________ .

A)DNA helicase
B)DNA ligase
C)primase
D)DNA polymerase III
E)DNA polymerase I
Question
DNA replication proceeds_________ .

A)discontinuously
B)progressively
C)semiconservatively
D)dispersively
E)unidirectionally
Question
If DNA replication were fully conservative,how many intact parental double helices would have been detected in Meselson and Stahl's experiment after three rounds of replication?

A)1
B)7
C)8
D)0
E)3
Question
The protein responsible for the initial step in unwinding the DNA helix during replication of the bacterial chromosome is coded for by the_________ gene.

A)polB
B)dnaA
C)gyrA
D)polA
E)dnaE
Question
During DNA replication,_________are 1000- 2000 nucleotide long strands synthesized on the _________ strand to maintain the_________ of replication.

A)Okazaki fragments; leading,accuracy
B)primers,lagging; continuity
C)Okazaki fragments; lagging; bidirectionality
D)primers; leading; discontinuity
E)Okazaki fragments; leading; semidiscontinuity
Question
After ONE round of DNA replication in Meselson and Stahl's classic experiment,_________.

A)the conservative model was conclusively proven to be an inaccurate model
B)both the conservative and the semiconservative models were still possibilities
C)the semiconservative model was conclusively proven to be the accurate model
D)the dispersive model was conclusively proven to be an inaccurate model
E)all three models of replication were still possibilities
Question
Which cluster of terms accurately reflects the nature of DNA replication in prokaryotes?

A)fixed point of initiation,bidirectional,conservative
B)random point of initiation,bidirectional,semiconservative
C)random point of initiation,unidirectional,semiconservative
D)fixed point of initiation,bidirectional,semiconservative
E)fixed point of initiation,unidirectional,conservative
Question
Which of the following statements about the oriC region in E.coli is incorrect?

A)It includes five repeating sequences of 9 base pairs.
B)It is 245 base pairs in length.
C)It includes three repeating sequences of 13 base pairs.
D)It is rich in AT base pairs.
E)It is directly recognized and bound by DNA helicase.
Question
Compare and contrast DNA Polymerases I,II,and III in E.coli.What capabilities are shared,and which are exclusive to only one type of polymerase?
Question
Telomerase reads _________ as a template and synthesizes _________as a product.

A)DNA; RNA
B)DNA; DNA
C)DNA; protein
D)RNA; RNA
E)RNA; DNA
Question
The process of making DNA from an RNA template is referred to as_________ .

A)transcription
B)transversion
C)recombination
D)reverse transcription
E)translation
Question
Explain why DNA primers can be used in in vitro DNA synthesis reactions,but not in vivo.
Question
The activity of_________ would be quickly undone in the absence of single- stranded binding protein.

A)DNA ligase
B)DNA polymerase I
C)primase
D)DNA polymerase III
E)DNA helicase
Question
DNA replication in eukaryotes_________ .

A)occurs without the need of a primer
B)takes place multiple times per cell cycle
C)synthesizes DNA approximately 25 times faster than in prokaryotes
D)utilizes a single type of DNA polymerase
E)initiates at multiple origins
Question
Describe the benefit to researchers of conditional mutants.
Question
The Meselson and Stahl's experiment provided conclusive evidence for the semiconservative replication of DNA in E.coli.What pattern of bands would occur in a CsCl gradient for conservative replication?
Question
A molecule that possesses both a protein component and an RNA component is referred to as a _________.

A)holoenzyme
B)ribonucleoprotein
C)polymerase
D)tetramer
E)dimer
Question
Why does DNA replication have to be semidiscontinuous in order to be bidirectional?
Question
Which eukaryotic DNA polymerase would least likely be involved in repair?

A)fi
B)s
C)a
D)6
E)y
Question
Which of the following is not an essential step in homologous recombination?

A)exonuclease degradation
B)strand displacement
C)duplex separation
D)branch migration
E)endonuclease nicking
Question
Chromatin is defined as_________ .

A)DNA complexed with protein
B)supercoiled loops of bacterial DNA
C)hybrid molecules of DNA and RNA
D)a catalytic molecule with a protein component and an RNA component
E)genetic material found only in mitochondria
Question
Structures located at the ends of eukaryotic chromosomes are called_________ .

A)permissive mutations
B)recessive mutations
C)telomeres
D)centromeres
E)telomerases
Question
Briefly describe what is meant by the term autoradiography and identify a classic experiment that used autoradiography to determine the replicative nature of DNA in eukaryotes.
Question
A drug is added to a culture of E.coli cells that inhibit DNA gyrase.Predict the effect of this drug on DNA replication in the affected cells.
Question
Explain the need for,and action of,DNA gyrase in bacterial DNA replication.
Question
Assembly of new nucleosomes is carried out by complexes abbreviated_________ .

A)DSB
B)TLS
C)TERC
D)SSB
E)CAF
Question
Telomerase adds nucleotides to the_________ .

A)5' end of the daughter strand
B)5' end of the parental strand
C)3' end of the parental strand
D)3' end of the daughter strand
Question
DNA replication in vivo requires a primer with a free 3' end.What molecular species provides this 3' end,and how is it provided?
Question
What is meant by homologous recombination?
Question
Describe two processes for which recombination is essential.
Question
Describe a somewhat extraordinary finding related to the Tetrahymena telomerase enzyme.
Question
What is the name of the replication unit in prokaryotes,and how does it differ in eukaryotes?
Question
Compare and contrast DNA replication in prokaryotes and eukaryotes.
Question
Compare the rate of DNA replication in prokaryotes and eukaryotes.
Question
Why are bacteria not dependent on telomerase for complete DNA replication?
Question
What is meant by processivity of a DNA- synthesizing enzyme?
Question
What is meant by a gene knockout?
Question
Describe the DNA base sequence arrangement at the end of the Tetrahymena chromosome and the resolution of DNA replication at the end of a linear DNA strand.
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Deck 11: DNA Replication and Recombination
1
The amount of DNA that is replicated from a single origin of replication is referred to as an_________ .

A)Okazaki fragment
B)ori
C)fork
D)primer
E)replicon
replicon
2
Given the accompanying diagram,assume that a G1 chromosome left underwent one round of replication in 3H- thymidine and the metaphase chromosome right)had both chromatids labeled.Which of the following replicative models conservative,dispersive,semiconservative)could be eliminated by this observation? <strong>Given the accompanying diagram,assume that a G1 chromosome left underwent one round of replication in<sup> </sup><sup>3</sup>H- thymidine and the metaphase chromosome right)had both chromatids labeled.Which of the following replicative models conservative,dispersive,semiconservative)could be eliminated by this observation?  </strong> A)semiconservative B)dispersive C)conservative D)conservative and dispersive E)semiconservative and dispersive

A)semiconservative
B)dispersive
C)conservative
D)conservative and dispersive
E)semiconservative and dispersive
conservative
3
Which DNA Polymerase III subunit is not part of the clamp loading assembly?

A)0
B)ç
C)6
D)v
E)y
A
4
If E.coli DNA polymerase III was able to initiate DNA synthesis opposite a single- stranded template,which molecules)would no longer be essential?

A)single- stranded binding proteins
B)DNA gyrase
C)DNA ligase
D)DNA polymerase I
E)helicase
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
5
DNA polymerase III adds nucleotides_________ .

A)in the place of the primer RNA after it is removed
B)to internal sites in the DNA template
C)to the 5' end of the RNA primer
D)to the 3' end of the RNA primer
E)to both ends of the RNA primer
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
6
DNA replication occurs by adding_________ .

A)NTPs to the 5' end of the daughter strand
B)dNTPs to the 3' end of the template strand
C)NTPs to the 3' end of the daughter strand
D)dNTPs to the 3' end of the daughter strand
E)dNTPs to the 5' end of the template strand
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
7
Which terms accurately reflect the nature of replication of the chromosome in E.coli?

A)bidirectional and multirepliconic
B)bidirectional and fixed point of initiation
C)unidirectional and fixed point of initiation
D)multirepliconic and telomeric
E)unidirectional and reciprocal
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
8
As unwinding of the helix occurs during DNA replication,tension referred to as_________ is created ahead of the replication fork.This tension is relieved by the action of_________ .

A)supercoiling; single- stranded binding proteins
B)processivity; DNA gyrase
C)supercoiling; DNA gyrase
D)supercoiling; DNA helicase
E)processivity; primase
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
9
Which of the following terms accurately describes the replication of DNA in vivo?

A)conservative
B)dispersive
C)nonreciprocal
D)semidiscontinuous
E)nonlinear
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
10
DNA polymerase I is thought to add nucleotides_________ .

A)to the 5' end of the primer
B)on single- stranded templates without need for an RNA primer
C)to the 3' end of the primer
D)in the place of the primer RNA after it is removed
E)in a 5' to 5' direction
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
11
Which of the following statement about DNA replication in E.coli is correct?

A)Single- stranded binding proteins are only required on the leading strand.
B)Only the lagging strand needs to be primed.
C)There are two molecules of DNA polymerase III per replication fork.
D)DNA polymerase I follows closely behind DNA helicase in the replication fork.
E)There are two molecules of DNA helicase per replication fork.
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
12
The discontinuous aspect of replication of DNA in vivo is caused by_________.

A)topoisomerases cutting the DNA in a random fashion
B)sister- chromatid exchanges
C)trinucleotide repeats
D)the 5' to 3' polarity restriction
E)polymerase slippage
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
13
The protein product of the E.coli dnaE gene is a component of_________ .

A)DNA helicase
B)DNA ligase
C)primase
D)DNA polymerase III
E)DNA polymerase I
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Unlock Deck
k this deck
14
DNA replication proceeds_________ .

A)discontinuously
B)progressively
C)semiconservatively
D)dispersively
E)unidirectionally
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k this deck
15
If DNA replication were fully conservative,how many intact parental double helices would have been detected in Meselson and Stahl's experiment after three rounds of replication?

A)1
B)7
C)8
D)0
E)3
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Unlock for access to all 50 flashcards in this deck.
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k this deck
16
The protein responsible for the initial step in unwinding the DNA helix during replication of the bacterial chromosome is coded for by the_________ gene.

A)polB
B)dnaA
C)gyrA
D)polA
E)dnaE
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
17
During DNA replication,_________are 1000- 2000 nucleotide long strands synthesized on the _________ strand to maintain the_________ of replication.

A)Okazaki fragments; leading,accuracy
B)primers,lagging; continuity
C)Okazaki fragments; lagging; bidirectionality
D)primers; leading; discontinuity
E)Okazaki fragments; leading; semidiscontinuity
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
18
After ONE round of DNA replication in Meselson and Stahl's classic experiment,_________.

A)the conservative model was conclusively proven to be an inaccurate model
B)both the conservative and the semiconservative models were still possibilities
C)the semiconservative model was conclusively proven to be the accurate model
D)the dispersive model was conclusively proven to be an inaccurate model
E)all three models of replication were still possibilities
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
19
Which cluster of terms accurately reflects the nature of DNA replication in prokaryotes?

A)fixed point of initiation,bidirectional,conservative
B)random point of initiation,bidirectional,semiconservative
C)random point of initiation,unidirectional,semiconservative
D)fixed point of initiation,bidirectional,semiconservative
E)fixed point of initiation,unidirectional,conservative
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
20
Which of the following statements about the oriC region in E.coli is incorrect?

A)It includes five repeating sequences of 9 base pairs.
B)It is 245 base pairs in length.
C)It includes three repeating sequences of 13 base pairs.
D)It is rich in AT base pairs.
E)It is directly recognized and bound by DNA helicase.
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
21
Compare and contrast DNA Polymerases I,II,and III in E.coli.What capabilities are shared,and which are exclusive to only one type of polymerase?
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k this deck
22
Telomerase reads _________ as a template and synthesizes _________as a product.

A)DNA; RNA
B)DNA; DNA
C)DNA; protein
D)RNA; RNA
E)RNA; DNA
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Unlock Deck
k this deck
23
The process of making DNA from an RNA template is referred to as_________ .

A)transcription
B)transversion
C)recombination
D)reverse transcription
E)translation
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
24
Explain why DNA primers can be used in in vitro DNA synthesis reactions,but not in vivo.
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
25
The activity of_________ would be quickly undone in the absence of single- stranded binding protein.

A)DNA ligase
B)DNA polymerase I
C)primase
D)DNA polymerase III
E)DNA helicase
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
26
DNA replication in eukaryotes_________ .

A)occurs without the need of a primer
B)takes place multiple times per cell cycle
C)synthesizes DNA approximately 25 times faster than in prokaryotes
D)utilizes a single type of DNA polymerase
E)initiates at multiple origins
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
27
Describe the benefit to researchers of conditional mutants.
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Unlock Deck
k this deck
28
The Meselson and Stahl's experiment provided conclusive evidence for the semiconservative replication of DNA in E.coli.What pattern of bands would occur in a CsCl gradient for conservative replication?
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
29
A molecule that possesses both a protein component and an RNA component is referred to as a _________.

A)holoenzyme
B)ribonucleoprotein
C)polymerase
D)tetramer
E)dimer
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
30
Why does DNA replication have to be semidiscontinuous in order to be bidirectional?
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k this deck
31
Which eukaryotic DNA polymerase would least likely be involved in repair?

A)fi
B)s
C)a
D)6
E)y
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
32
Which of the following is not an essential step in homologous recombination?

A)exonuclease degradation
B)strand displacement
C)duplex separation
D)branch migration
E)endonuclease nicking
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
33
Chromatin is defined as_________ .

A)DNA complexed with protein
B)supercoiled loops of bacterial DNA
C)hybrid molecules of DNA and RNA
D)a catalytic molecule with a protein component and an RNA component
E)genetic material found only in mitochondria
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
34
Structures located at the ends of eukaryotic chromosomes are called_________ .

A)permissive mutations
B)recessive mutations
C)telomeres
D)centromeres
E)telomerases
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
35
Briefly describe what is meant by the term autoradiography and identify a classic experiment that used autoradiography to determine the replicative nature of DNA in eukaryotes.
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
36
A drug is added to a culture of E.coli cells that inhibit DNA gyrase.Predict the effect of this drug on DNA replication in the affected cells.
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Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
37
Explain the need for,and action of,DNA gyrase in bacterial DNA replication.
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Unlock for access to all 50 flashcards in this deck.
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k this deck
38
Assembly of new nucleosomes is carried out by complexes abbreviated_________ .

A)DSB
B)TLS
C)TERC
D)SSB
E)CAF
Unlock Deck
Unlock for access to all 50 flashcards in this deck.
Unlock Deck
k this deck
39
Telomerase adds nucleotides to the_________ .

A)5' end of the daughter strand
B)5' end of the parental strand
C)3' end of the parental strand
D)3' end of the daughter strand
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k this deck
40
DNA replication in vivo requires a primer with a free 3' end.What molecular species provides this 3' end,and how is it provided?
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k this deck
41
What is meant by homologous recombination?
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k this deck
42
Describe two processes for which recombination is essential.
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k this deck
43
Describe a somewhat extraordinary finding related to the Tetrahymena telomerase enzyme.
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Unlock Deck
k this deck
44
What is the name of the replication unit in prokaryotes,and how does it differ in eukaryotes?
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k this deck
45
Compare and contrast DNA replication in prokaryotes and eukaryotes.
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k this deck
46
Compare the rate of DNA replication in prokaryotes and eukaryotes.
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k this deck
47
Why are bacteria not dependent on telomerase for complete DNA replication?
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k this deck
48
What is meant by processivity of a DNA- synthesizing enzyme?
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k this deck
49
What is meant by a gene knockout?
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50
Describe the DNA base sequence arrangement at the end of the Tetrahymena chromosome and the resolution of DNA replication at the end of a linear DNA strand.
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