Deck 28: Biomolecules: Nucleic Acids

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Question
Draw and label the four DNA nucleosides.
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Question
Draw and label an A-U base pair.Indicate all hydrogen bonds with a dashed line.
Question
Of the two sets of DNA base pairs,which would you expect to be stronger and why?
Question
_____ uridine

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px> M)AGATCGCTC
Question
_____ 2'-deoxyadenosine 5'-phosphate

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px> M)AGATCGCTC
Question
Describe,in general terms,the steps involved in the automated synthesis of the DNA sequence GCT.
Question
Draw and label an A-T base pair.Indicate all hydrogen bonds with a dashed line.
Question
_____ a pyrimidine nucleoside

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px> M) AGATCGCTC
Question
Draw and label the four RNA nucleosides.
Question
_____ DNA sequencing method for the human genome

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px> M)AGATCGCTC
Question
_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe:
CTAGCATTT

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px> M)AGATCGCTC
Question
_____ process by which mRNA directs protein synthesis

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC <div style=padding-top: 35px> M)AGATCGCTC
Question
While the Watson-Crick G-C and A-T base pairs are the most common,other non-standard base pairs are encountered.Draw and label a G-U base pair.Indicate all hydrogen bonds with a dashed line.
Question
_____ a purine nucleoside

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
M) AGATCGCTC
Question
What is the primary structural difference between RNA nucleotides and DNA nucleotides?
Question
_____ RNA base sequence with guanine at the 3' end.

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px> M) AGATCGCTC
Question
The process invented in 1986 which allows multiple copies of a given DNA sequence to be produced is:

A)the polymerase chain reaction.
B)the Sanger dideoxy method.
C)the Maxam-Gilbert method.
D)the restriction endonuclease reaction.
Question
_____ DNA base sequence with cytosine at the 3' end.

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
F)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
L)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC <div style=padding-top: 35px>
M) AGATCGCTC
Question
Because of the structure of the RNA sugar-phosphate backbone,RNA is subject to base-promoted hydrolysis,as shown below.Suggest a mechanism for base-promoted RNA hydrolysis. Because of the structure of the RNA sugar-phosphate backbone,RNA is subject to base-promoted hydrolysis,as shown below.Suggest a mechanism for base-promoted RNA hydrolysis.  <div style=padding-top: 35px>
Question
Draw and label a G-C base pair.Indicate all hydrogen bonds with a dashed line.
Question
1) Label the anticodon
2) Label the position of attachment of the amino acid
3) Draw the structure of the amino acid that would be attached
4) Indicate the corresponding mRNA codon
Question
When DNA is replicated,the new chain is synthesized in what direction?
Question
During DNA synthesis,the free amino group does not need to be protected for which base?

A)Adenine
B)Guanine
C)Thymine
D)Cytosine
Question
Give a one sentence definition of translation.
Question
What is the purpose of the addition of aqueous ammonia during the synthesis of DNA?

A)Cleavage of the ester bond to the silica support
B)Removal of the groups protecting the free amino group of the bases
C)Removal of the protecting group of the 5' -OH of the sugar
D)Ammonia accomplishes all of the above.
Question
In the diagram below,fill in the terms in the appropriate places indicated by a letter. <strong>In the diagram below,fill in the terms in the appropriate places indicated by a letter.  </strong> A)A - replication,B - transcription,C - translation B)A - replication,B - translation,C - transcription C)A - transcription,B - replication,C - translation D)A - translation,B - transcription,C - replication <div style=padding-top: 35px>

A)A - replication,B - transcription,C - translation
B)A - replication,B - translation,C - transcription
C)A - transcription,B - replication,C - translation
D)A - translation,B - transcription,C - replication
Question
During DNA synthesis,how is the 5' -OH of deoxyribose protected?

A)With a p-dimethoxytrityl group
B)With a benzoyl group
C)With an isobutryl group
D)With a β-cyanoethyl group
E)This group does not need to be protected.
Question
Consider the following diagram. <strong>Consider the following diagram.   What amino acid corresponds to the second codon from the left?</strong> A)Tyrosine B)Asparagine C)Isoleucine D)None,the mRNA codon is a stop signal <div style=padding-top: 35px> What amino acid corresponds to the second codon from the left?

A)Tyrosine
B)Asparagine
C)Isoleucine
D)None,the mRNA codon is a stop signal
Question
Consider the following diagram. <strong>Consider the following diagram.   Which letter should be filled in on the bottom line?</strong> A)GCU B)UCG C)GCT D)TGC <div style=padding-top: 35px> Which letter should be filled in on the bottom line?

A)GCU
B)UCG
C)GCT
D)TGC
Question
Give a one sentence definition of replication.
Question
Give a one sentence definition of transcription.
Question
Consider the following diagram. ​ <strong>Consider the following diagram. ​   ​ What DNA sequence (5' to 3') would correspond to the third codon?</strong> A)GCU B)TCG C)UGC D)GCT <div style=padding-top: 35px>
What DNA sequence (5' to 3') would correspond to the third codon?

A)GCU
B)TCG
C)UGC
D)GCT
Question
Consider DNA sequencing experiments using 2',3'-dideoxyribonucleoside triphosphates.Which of the following is not correct?

A)2',3'-dideoxyribonucleoside triphosphates are added to the replicating strand by DNA polymerase.
B)There are four types of 2',3'-dideoxyribonucleoside triphosphates used.
C)The sequence of 2',3'-dideoxyribonucleoside triphosphates in the replicated DNA yields the DNA structure.
D)DNA replication ceases when a 2',3'-dideoxyribonucleoside triphosphates is added to the replicating strand.
Question
Give the single letter amino acid sequence that is coded for by the following segment of DNA coding strand (sense strand)?
(5') GCA-TTT-CTA-ACT-TGA-GGG (3')
Question
Consider the following molecular model.Atoms other than carbon and hydrogen are labeled. <strong>Consider the following molecular model.Atoms other than carbon and hydrogen are labeled.   Which of the following is a characteristic of this compound?</strong> A)Found in DNA B)Found in both DNA and RNA C)Pyrimidine base D)Pairs with thymine <div style=padding-top: 35px> Which of the following is a characteristic of this compound?

A)Found in DNA
B)Found in both DNA and RNA
C)Pyrimidine base
D)Pairs with thymine
Question
Identify any errors in the figure shown below. Identify any errors in the figure shown below.  <div style=padding-top: 35px>
Question
Consider the DNA polymerase chain reaction.After 5 cycles have been completed,how many copies of the original DNA are present?

A)10
B)32
C)64
D)128
Question
In determining DNA sequencing using the Sanger dideoxy method,how many colors will appear in the resulting data display?

A)2
B)4
C)6
D)8
Question
On the diagram of DNA, identify:
1) major groove
2) minor groove
3) position of the sugar-phosphate backbone
4) site of possible intercalation On the diagram of DNA, identify: 1) major groove 2) minor groove 3) position of the sugar-phosphate backbone 4) site of possible intercalation  <div style=padding-top: 35px>
Question
Consider the following molecular model.Atoms other than carbon and hydrogen are labeled. <strong>Consider the following molecular model.Atoms other than carbon and hydrogen are labeled.   Which of the following is a characteristic of this structure?</strong> A)Nucleoside B)Contains ribose C)Contains a purine base D)Found only in DNA <div style=padding-top: 35px> Which of the following is a characteristic of this structure?

A)Nucleoside
B)Contains ribose
C)Contains a purine base
D)Found only in DNA
Question
Using the PCR method for synthesizing DNA,why don't the two DNA strands recombine during the cooling phase?

A)The temperature used
B)The concentration of the primers
C)Presence of Mg2+
D)Presence of Taq polymerase
Question
Which of the following statement correctly describes DNA replication?

A)Replication occurs in the <strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . <div style=padding-top: 35px> direction.
B)Ligases link the Okazaki fragments to form the lagging strand.
C)The leading strand is replicated discontinuously.
D)One strand is replicated <strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . <div style=padding-top: 35px> while the other strand is replicated
<strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . <div style=padding-top: 35px> .
Question
When the β-cyanoethyl group is removed during DNA synthesis,H2CCHCN is produced as a product.This reaction is likely to be:

A)E1
B)E2
C)E1cB
D)SN1
E)SN2
Question
Which of the following summarizes the steps in DNA synthesis using the PCR method?

A)Anneal-denature-synthesize
B)Synthesize-denature-anneal
C)Denature-anneal-synthesize
D)Denature-synthesize-anneal
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Deck 28: Biomolecules: Nucleic Acids
1
Draw and label the four DNA nucleosides.
2
Draw and label an A-U base pair.Indicate all hydrogen bonds with a dashed line.
3
Of the two sets of DNA base pairs,which would you expect to be stronger and why?
The G-C base pair is the stronger of the two as it has three hydrogen bonds whereas the A-T base pair has only two.
4
_____ uridine

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
F)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
L)<strong>_____ uridine</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC M)AGATCGCTC
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5
_____ 2'-deoxyadenosine 5'-phosphate

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
F)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
L)<strong>_____ 2'-deoxyadenosine 5'-phosphate</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC M)AGATCGCTC
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6
Describe,in general terms,the steps involved in the automated synthesis of the DNA sequence GCT.
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7
Draw and label an A-T base pair.Indicate all hydrogen bonds with a dashed line.
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8
_____ a pyrimidine nucleoside

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
F)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
L)<strong>_____ a pyrimidine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC M) AGATCGCTC
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9
Draw and label the four RNA nucleosides.
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10
_____ DNA sequencing method for the human genome

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
F)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
L)<strong>_____ DNA sequencing method for the human genome</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC M)AGATCGCTC
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11
_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe:
CTAGCATTT

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
F)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
L)<strong>_____ RNA base sequence complementary to the DNA base sequence which codes for Leu−Ala−Phe: CTAGCATTT</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC M)AGATCGCTC
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12
_____ process by which mRNA directs protein synthesis

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
F)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC
L)<strong>_____ process by which mRNA directs protein synthesis</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M)AGATCGCTC M)AGATCGCTC
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13
While the Watson-Crick G-C and A-T base pairs are the most common,other non-standard base pairs are encountered.Draw and label a G-U base pair.Indicate all hydrogen bonds with a dashed line.
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14
_____ a purine nucleoside

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
F)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
L)<strong>_____ a purine nucleoside</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
M) AGATCGCTC
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15
What is the primary structural difference between RNA nucleotides and DNA nucleotides?
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16
_____ RNA base sequence with guanine at the 3' end.

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
F)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
L)<strong>_____ RNA base sequence with guanine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC M) AGATCGCTC
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17
The process invented in 1986 which allows multiple copies of a given DNA sequence to be produced is:

A)the polymerase chain reaction.
B)the Sanger dideoxy method.
C)the Maxam-Gilbert method.
D)the restriction endonuclease reaction.
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18
_____ DNA base sequence with cytosine at the 3' end.

A)Sanger dideoxy method
B)GAUCGUAAA
C)Watson-Crick
D)translation
E)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
F)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
G)transcription
H)Maxam-Gilbert method
I)AUGGCUGAG
J)replication
K)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
L)<strong>_____ DNA base sequence with cytosine at the 3' end.</strong> A)Sanger dideoxy method B)GAUCGUAAA C)Watson-Crick D)translation E)  F)  G)transcription H)Maxam-Gilbert method I)AUGGCUGAG J)replication K)  L)  M) AGATCGCTC
M) AGATCGCTC
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19
Because of the structure of the RNA sugar-phosphate backbone,RNA is subject to base-promoted hydrolysis,as shown below.Suggest a mechanism for base-promoted RNA hydrolysis. Because of the structure of the RNA sugar-phosphate backbone,RNA is subject to base-promoted hydrolysis,as shown below.Suggest a mechanism for base-promoted RNA hydrolysis.
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20
Draw and label a G-C base pair.Indicate all hydrogen bonds with a dashed line.
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21
1) Label the anticodon
2) Label the position of attachment of the amino acid
3) Draw the structure of the amino acid that would be attached
4) Indicate the corresponding mRNA codon
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22
When DNA is replicated,the new chain is synthesized in what direction?
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23
During DNA synthesis,the free amino group does not need to be protected for which base?

A)Adenine
B)Guanine
C)Thymine
D)Cytosine
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24
Give a one sentence definition of translation.
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25
What is the purpose of the addition of aqueous ammonia during the synthesis of DNA?

A)Cleavage of the ester bond to the silica support
B)Removal of the groups protecting the free amino group of the bases
C)Removal of the protecting group of the 5' -OH of the sugar
D)Ammonia accomplishes all of the above.
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26
In the diagram below,fill in the terms in the appropriate places indicated by a letter. <strong>In the diagram below,fill in the terms in the appropriate places indicated by a letter.  </strong> A)A - replication,B - transcription,C - translation B)A - replication,B - translation,C - transcription C)A - transcription,B - replication,C - translation D)A - translation,B - transcription,C - replication

A)A - replication,B - transcription,C - translation
B)A - replication,B - translation,C - transcription
C)A - transcription,B - replication,C - translation
D)A - translation,B - transcription,C - replication
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27
During DNA synthesis,how is the 5' -OH of deoxyribose protected?

A)With a p-dimethoxytrityl group
B)With a benzoyl group
C)With an isobutryl group
D)With a β-cyanoethyl group
E)This group does not need to be protected.
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28
Consider the following diagram. <strong>Consider the following diagram.   What amino acid corresponds to the second codon from the left?</strong> A)Tyrosine B)Asparagine C)Isoleucine D)None,the mRNA codon is a stop signal What amino acid corresponds to the second codon from the left?

A)Tyrosine
B)Asparagine
C)Isoleucine
D)None,the mRNA codon is a stop signal
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29
Consider the following diagram. <strong>Consider the following diagram.   Which letter should be filled in on the bottom line?</strong> A)GCU B)UCG C)GCT D)TGC Which letter should be filled in on the bottom line?

A)GCU
B)UCG
C)GCT
D)TGC
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30
Give a one sentence definition of replication.
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31
Give a one sentence definition of transcription.
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32
Consider the following diagram. ​ <strong>Consider the following diagram. ​   ​ What DNA sequence (5' to 3') would correspond to the third codon?</strong> A)GCU B)TCG C)UGC D)GCT
What DNA sequence (5' to 3') would correspond to the third codon?

A)GCU
B)TCG
C)UGC
D)GCT
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33
Consider DNA sequencing experiments using 2',3'-dideoxyribonucleoside triphosphates.Which of the following is not correct?

A)2',3'-dideoxyribonucleoside triphosphates are added to the replicating strand by DNA polymerase.
B)There are four types of 2',3'-dideoxyribonucleoside triphosphates used.
C)The sequence of 2',3'-dideoxyribonucleoside triphosphates in the replicated DNA yields the DNA structure.
D)DNA replication ceases when a 2',3'-dideoxyribonucleoside triphosphates is added to the replicating strand.
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34
Give the single letter amino acid sequence that is coded for by the following segment of DNA coding strand (sense strand)?
(5') GCA-TTT-CTA-ACT-TGA-GGG (3')
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35
Consider the following molecular model.Atoms other than carbon and hydrogen are labeled. <strong>Consider the following molecular model.Atoms other than carbon and hydrogen are labeled.   Which of the following is a characteristic of this compound?</strong> A)Found in DNA B)Found in both DNA and RNA C)Pyrimidine base D)Pairs with thymine Which of the following is a characteristic of this compound?

A)Found in DNA
B)Found in both DNA and RNA
C)Pyrimidine base
D)Pairs with thymine
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36
Identify any errors in the figure shown below. Identify any errors in the figure shown below.
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37
Consider the DNA polymerase chain reaction.After 5 cycles have been completed,how many copies of the original DNA are present?

A)10
B)32
C)64
D)128
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38
In determining DNA sequencing using the Sanger dideoxy method,how many colors will appear in the resulting data display?

A)2
B)4
C)6
D)8
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39
On the diagram of DNA, identify:
1) major groove
2) minor groove
3) position of the sugar-phosphate backbone
4) site of possible intercalation On the diagram of DNA, identify: 1) major groove 2) minor groove 3) position of the sugar-phosphate backbone 4) site of possible intercalation
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40
Consider the following molecular model.Atoms other than carbon and hydrogen are labeled. <strong>Consider the following molecular model.Atoms other than carbon and hydrogen are labeled.   Which of the following is a characteristic of this structure?</strong> A)Nucleoside B)Contains ribose C)Contains a purine base D)Found only in DNA Which of the following is a characteristic of this structure?

A)Nucleoside
B)Contains ribose
C)Contains a purine base
D)Found only in DNA
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41
Using the PCR method for synthesizing DNA,why don't the two DNA strands recombine during the cooling phase?

A)The temperature used
B)The concentration of the primers
C)Presence of Mg2+
D)Presence of Taq polymerase
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42
Which of the following statement correctly describes DNA replication?

A)Replication occurs in the <strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . direction.
B)Ligases link the Okazaki fragments to form the lagging strand.
C)The leading strand is replicated discontinuously.
D)One strand is replicated <strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . while the other strand is replicated
<strong>Which of the following statement correctly describes DNA replication?</strong> A)Replication occurs in the   direction. B)Ligases link the Okazaki fragments to form the lagging strand. C)The leading strand is replicated discontinuously. D)One strand is replicated   while the other strand is replicated   . .
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43
When the β-cyanoethyl group is removed during DNA synthesis,H2CCHCN is produced as a product.This reaction is likely to be:

A)E1
B)E2
C)E1cB
D)SN1
E)SN2
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44
Which of the following summarizes the steps in DNA synthesis using the PCR method?

A)Anneal-denature-synthesize
B)Synthesize-denature-anneal
C)Denature-anneal-synthesize
D)Denature-synthesize-anneal
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